Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 AC117489.1-201ENST00000625169 3217 ntBASIC13.34□□□□□ -0.27
APOC1P02654 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
APOC1P02654 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
APOC1P02654 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC1P02654 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.34□□□□□ -0.27
APOC1P02654 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 FAM86LP-201ENST00000478302 853 ntBASIC13.34□□□□□ -0.27
APOC1P02654 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 GAPDHP40-201ENST00000505218 1006 ntBASIC13.34□□□□□ -0.27
APOC1P02654 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.34□□□□□ -0.27
APOC1P02654 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC1P02654 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC1P02654 AC009407.1-201ENST00000568958 598 ntBASIC13.34□□□□□ -0.27
APOC1P02654 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 AC232323.1-201ENST00000540724 2099 ntBASIC13.34□□□□□ -0.27
APOC1P02654 REXO1L5P-201ENST00000622260 2098 ntBASIC13.34□□□□□ -0.27
APOC1P02654 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.34□□□□□ -0.27
APOC1P02654 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC1P02654 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
APOC1P02654 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
APOC1P02654 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
APOC1P02654 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.33□□□□□ -0.28
APOC1P02654 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.33□□□□□ -0.28
APOC1P02654 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.33□□□□□ -0.28
APOC1P02654 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 AC004890.2-204ENST00000481968 304 ntBASIC13.33□□□□□ -0.28
APOC1P02654 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
APOC1P02654 AL391069.4-201ENST00000609583 481 ntBASIC13.33□□□□□ -0.28
APOC1P02654 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms