Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
BEST1O76090 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
BEST1O76090 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 AC092135.3-201ENST00000624151 1846 ntBASIC15.62■□□□□ 0.09
BEST1O76090 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.62■□□□□ 0.09
BEST1O76090 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 KLF2P1-201ENST00000447438 1042 ntBASIC15.62■□□□□ 0.09
BEST1O76090 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.62■□□□□ 0.09
BEST1O76090 FAM8A2P-201ENST00000528813 1142 ntBASIC15.62■□□□□ 0.09
BEST1O76090 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 DUX4L46-201ENST00000566845 751 ntBASIC15.62■□□□□ 0.09
BEST1O76090 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.62■□□□□ 0.09
BEST1O76090 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.62■□□□□ 0.09
BEST1O76090 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 AL008638.5-201ENST00000623814 1298 ntBASIC15.62■□□□□ 0.09
BEST1O76090 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BEST1O76090 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
BEST1O76090 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 AC007686.3-201ENST00000619017 3487 ntBASIC15.62■□□□□ 0.09
BEST1O76090 AC006504.5-208ENST00000588784 2401 ntBASIC15.62■□□□□ 0.09
BEST1O76090 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BEST1O76090 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
BEST1O76090 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.61■□□□□ 0.09
BEST1O76090 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.61■□□□□ 0.09
BEST1O76090 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 MIR4525-201ENST00000580000 75 ntBASIC15.61■□□□□ 0.09
BEST1O76090 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
BEST1O76090 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 AL162426.1-201ENST00000624141 743 ntBASIC15.61■□□□□ 0.09
BEST1O76090 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.61■□□□□ 0.09
BEST1O76090 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
BEST1O76090 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
BEST1O76090 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
BEST1O76090 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BEST1O76090 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms