Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH4O75427 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 AL512384.1-201ENST00000406683 331 ntBASIC15.54■□□□□ 0.08
LRCH4O75427 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 FTLP10-202ENST00000505798 471 ntBASIC15.54■□□□□ 0.08
LRCH4O75427 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH4O75427 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
LRCH4O75427 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH4O75427 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 IGHV3-72-202ENST00000621503 303 ntBASIC15.54■□□□□ 0.08
LRCH4O75427 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.54■□□□□ 0.08
LRCH4O75427 AC105233.6-201ENST00000642093 218 ntBASIC15.54■□□□□ 0.08
LRCH4O75427 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
LRCH4O75427 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH4O75427 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH4O75427 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH4O75427 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH4O75427 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH4O75427 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 FKBP4P6-201ENST00000457486 1332 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LRCH4O75427 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 COX5BP8-201ENST00000416911 349 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.53■□□□□ 0.08
LRCH4O75427 TTTY23B-201ENST00000442790 549 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 BCRP2-202ENST00000447763 634 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 BCRP6-201ENST00000510112 632 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 BCRP7-201ENST00000511549 544 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.53■□□□□ 0.08
LRCH4O75427 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.53■□□□□ 0.08
LRCH4O75427 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.53■□□□□ 0.08
LRCH4O75427 AC233724.13-201ENST00000598383 410 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 ECM1P1-201ENST00000604092 1279 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 AC132938.4-201ENST00000623835 848 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 AL035252.4-201ENST00000624174 288 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH4O75427 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 AC009093.2-202ENST00000620513 2079 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH4O75427 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRCH4O75427 AC152010.1-201ENST00000415779 2006 ntBASIC15.53■□□□□ 0.08
LRCH4O75427 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 AP000593.2-201ENST00000542775 1433 ntBASIC15.52■□□□□ 0.08
LRCH4O75427 CU639417.3-201ENST00000624240 1404 ntBASIC15.52■□□□□ 0.08
LRCH4O75427 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms