Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL023775.1-201ENST00000454907 1746 ntBASIC16.84■□□□□ 0.29
CHMP2AO43633 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.83■□□□□ 0.29
CHMP2AO43633 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP2AO43633 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.83■□□□□ 0.29
CHMP2AO43633 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 FAM86MP-201ENST00000340703 885 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 MIR326-201ENST00000362220 95 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP2AO43633 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CHMP2AO43633 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 MIR1908-201ENST00000410394 80 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP2AO43633 TUBB1P2-201ENST00000422712 1306 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 Z93015.1-201ENST00000451718 390 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 TUBB1P1-201ENST00000503144 1300 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 AC092658.1-201ENST00000505836 891 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 FAM86HP-204ENST00000513466 959 ntBASIC16.83■□□□□ 0.28
CHMP2AO43633 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP2AO43633 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.83■□□□□ 0.28
CHMP2AO43633 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP2AO43633 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CHMP2AO43633 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP2AO43633 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP2AO43633 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP2AO43633 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHMP2AO43633 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP2AO43633 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP2AO43633 AP000593.2-201ENST00000542775 1433 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 TNRC18P2-201ENST00000417666 2714 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP2AO43633 AL138725.1-201ENST00000407347 1314 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 RN7SKP175-201ENST00000408472 289 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.82■□□□□ 0.28
CHMP2AO43633 AC004945.1-201ENST00000416738 983 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP2AO43633 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP2AO43633 HIST2H2BB-201ENST00000449108 381 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP2AO43633 EEF1DP1-201ENST00000585891 896 ntBASIC16.82■□□□□ 0.28
CHMP2AO43633 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP2AO43633 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP2AO43633 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms