Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TO15178 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
TO15178 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TO15178 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TO15178 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
TO15178 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TO15178 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.81□□□□□ -0.2
TO15178 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.81□□□□□ -0.2
TO15178 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 AC011840.2-201ENST00000563063 1520 ntBASIC13.81□□□□□ -0.2
TO15178 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 AL161772.1-201ENST00000610494 4412 ntBASIC13.81□□□□□ -0.2
TO15178 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TO15178 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 ANKRD19P-201ENST00000338192 862 ntBASIC13.81□□□□□ -0.2
TO15178 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TO15178 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.81□□□□□ -0.2
TO15178 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
TO15178 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.81□□□□□ -0.2
TO15178 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TO15178 AC022210.1-201ENST00000449856 793 ntBASIC13.81□□□□□ -0.2
TO15178 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 ALG3P1-201ENST00000508806 1114 ntBASIC13.81□□□□□ -0.2
TO15178 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 HILS1-202ENST00000545329 423 ntBASIC13.81□□□□□ -0.2
TO15178 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 AP005482.1-201ENST00000563722 1273 ntBASIC13.81□□□□□ -0.2
TO15178 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.81□□□□□ -0.2
TO15178 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.81□□□□□ -0.2
TO15178 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.81□□□□□ -0.2
TO15178 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TO15178 AC008687.7-202ENST00000637404 953 ntBASIC13.81□□□□□ -0.2
TO15178 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TO15178 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TO15178 AHCYP2-201ENST00000430630 1300 ntBASIC13.81□□□□□ -0.2
TO15178 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TO15178 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TO15178 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.81□□□□□ -0.2
TO15178 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TO15178 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
TO15178 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.8□□□□□ -0.2
TO15178 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.8□□□□□ -0.2
TO15178 OR8S1-201ENST00000310194 1080 ntBASIC13.8□□□□□ -0.2
TO15178 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 RN7SKP175-201ENST00000408472 289 ntBASIC13.8□□□□□ -0.2
TO15178 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.8□□□□□ -0.2
TO15178 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TO15178 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.8□□□□□ -0.2
TO15178 AL391280.1-201ENST00000506969 1062 ntBASIC13.8□□□□□ -0.2
TO15178 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.8□□□□□ -0.2
TO15178 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.8□□□□□ -0.2
TO15178 AP003171.2-201ENST00000528208 925 ntBASIC13.8□□□□□ -0.2
TO15178 SNX29P1-201ENST00000548357 1007 ntBASIC13.8□□□□□ -0.2
TO15178 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.8□□□□□ -0.2
TO15178 C2orf69P2-201ENST00000562032 1123 ntBASIC13.8□□□□□ -0.2
TO15178 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.8□□□□□ -0.2
TO15178 MIR6775-201ENST00000617557 69 ntBASIC13.8□□□□□ -0.2
TO15178 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.8□□□□□ -0.2
TO15178 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.8□□□□□ -0.2
TO15178 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TO15178 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.8□□□□□ -0.2
TO15178 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TO15178 CICP23-201ENST00000605013 2741 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms