Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 AC016397.2-201ENST00000624848 1985 ntBASIC14.2□□□□□ -0.14
UPK1AO00322 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1AO00322 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UPK1AO00322 AL139094.1-201ENST00000405549 1188 ntBASIC14.2□□□□□ -0.14
UPK1AO00322 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 TP53TG3HP-202ENST00000569755 579 ntBASIC14.2□□□□□ -0.14
UPK1AO00322 WFDC1-204ENST00000613603 549 ntBASIC14.2□□□□□ -0.14
UPK1AO00322 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UPK1AO00322 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
UPK1AO00322 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
UPK1AO00322 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1AO00322 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1AO00322 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.19□□□□□ -0.14
UPK1AO00322 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.19□□□□□ -0.14
UPK1AO00322 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UPK1AO00322 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 DGCR9-201ENST00000609630 2415 ntBASIC14.19□□□□□ -0.14
UPK1AO00322 KRT8P14-201ENST00000414254 1442 ntBASIC14.19□□□□□ -0.14
UPK1AO00322 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UPK1AO00322 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 AC114812.1-204ENST00000449669 728 ntBASIC14.19□□□□□ -0.14
UPK1AO00322 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 ENPP7P5-201ENST00000541031 1031 ntBASIC14.19□□□□□ -0.14
UPK1AO00322 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UPK1AO00322 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1AO00322 AC005252.2-201ENST00000624630 1141 ntBASIC14.19□□□□□ -0.14
UPK1AO00322 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1AO00322 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UPK1AO00322 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1AO00322 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms