Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 AL157813.1-201ENST00000612996 587 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 AC079336.7-201ENST00000623428 1078 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 KRT8P21-201ENST00000430398 1491 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 AC091951.1-201ENST00000512854 2465 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 TMBIM7P-202ENST00000641474 1516 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
MBD3L3A6NE82 AC139712.1-201ENST00000378256 1875 ntBASIC13.02□□□□□ -0.33
MBD3L3A6NE82 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 XBP1P1-201ENST00000436573 652 ntBASIC13.01□□□□□ -0.33
MBD3L3A6NE82 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 POU5F1P2-201ENST00000521750 823 ntBASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AC134698.3-201ENST00000523880 214 ntBASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AF254983.2-201ENST00000612331 135 ntBASIC13.01□□□□□ -0.33
MBD3L3A6NE82 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 AC013268.4-201ENST00000637413 2228 ntBASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L3A6NE82 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MBD3L3A6NE82 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L3A6NE82 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AC132872.4-202ENST00000622924 2756 ntBASIC13□□□□□ -0.33
MBD3L3A6NE82 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 R3HDM2P2-201ENST00000401880 2116 ntBASIC13□□□□□ -0.33
MBD3L3A6NE82 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L3A6NE82 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms