Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CNN2P8-201ENST00000421872 913 ntBASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 AC010328.2-201ENST00000597698 1111 ntBASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 BX640514.1-201ENST00000583223 1918 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 MIR1908-201ENST00000410394 80 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 ACTBP11-201ENST00000436287 1126 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC026434.2-201ENST00000506094 1078 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC138951.2-201ENST00000623455 1161 ntBASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPDC1A2A3K4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AL138709.1-201ENST00000614840 1693 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 TUBB1P2-201ENST00000422712 1306 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 TUBB1P1-201ENST00000503144 1300 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 991.3 ms