Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AL138725.1-201ENST00000407347 1314 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC092933.1-201ENST00000393644 945 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 KRT17P7-201ENST00000451704 1104 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC005225.4-201ENST00000557330 545 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 BTNL10-201ENST00000595971 695 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC023908.3-201ENST00000564211 3047 ntBASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 MESTP3-201ENST00000503460 968 ntBASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AC012645.4-201ENST00000610691 1061 ntBASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 AC138466.3-201ENST00000619983 221 ntBASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4E1Q9UPM8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 AL354702.1-201ENST00000442006 1960 ntBASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4E1Q9UPM8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms