Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 AL359711.2-201ENST00000563105 872 ntBASIC13.54□□□□□ -0.24
ZNF346Q9UL40 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 CICP4-201ENST00000447359 2812 ntBASIC13.54□□□□□ -0.24
ZNF346Q9UL40 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF346Q9UL40 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AL442647.2-201ENST00000429864 857 ntBASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 CRB3P1-201ENST00000449338 276 ntBASIC13.53□□□□□ -0.24
ZNF346Q9UL40 COX20P2-201ENST00000452636 358 ntBASIC13.53□□□□□ -0.24
ZNF346Q9UL40 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AL132655.2-201ENST00000596276 594 ntBASIC13.53□□□□□ -0.24
ZNF346Q9UL40 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AC007541.1-201ENST00000570282 1469 ntBASIC13.53□□□□□ -0.24
ZNF346Q9UL40 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF346Q9UL40 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
ZNF346Q9UL40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 AL035633.1-201ENST00000406139 838 ntBASIC13.52□□□□□ -0.25
ZNF346Q9UL40 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 AC098850.1-201ENST00000419919 790 ntBASIC13.52□□□□□ -0.25
ZNF346Q9UL40 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.52□□□□□ -0.25
ZNF346Q9UL40 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms