Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AC007191.1-201ENST00000623179 2995 ntBASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 GPAA1P2-201ENST00000417923 928 ntBASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AC016700.1-201ENST00000429424 312 ntBASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AC106794.1-201ENST00000506935 792 ntBASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.83■□□□□ 0.76
NPC1L1Q9UHC9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 KRT8P13-201ENST00000463294 1010 ntBASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPC1L1Q9UHC9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AHCYP4-201ENST00000419201 1315 ntBASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AC136759.1-202ENST00000530858 2194 ntBASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AL451050.2-201ENST00000606967 682 ntBASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPC1L1Q9UHC9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 AC018629.1-201ENST00000623381 1736 ntBASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPC1L1Q9UHC9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms