Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 CNN2P8-201ENST00000421872 913 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 KRT43P-201ENST00000434019 910 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AC007551.1-201ENST00000457394 519 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 MESTP3-201ENST00000503460 968 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AC244669.2-201ENST00000612320 853 ntBASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCMF1Q9P0J7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 CLUHP2-201ENST00000426660 1303 ntBASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCMF1Q9P0J7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms