Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 AC109635.5-201ENST00000533593 962 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SART3-203ENST00000546611 1184 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 MIR1199-201ENST00000621445 119 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 AC110048.1-201ENST00000604293 2157 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX6-2Q9C056 IER3-202ENST00000376377 1350 ntBASIC12.18□□□□□ -0.46
NKX6-2Q9C056 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms