Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SMIM3Q9BZL3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AL445209.1-201ENST00000607269 3491 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 CR383656.2-201ENST00000548656 2254 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 VN2R19P-201ENST00000442399 1052 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC105233.2-201ENST00000523697 349 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AF228730.5-201ENST00000530288 346 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC073389.1-201ENST00000595595 795 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC093458.2-201ENST00000623150 629 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC117500.6-201ENST00000624871 588 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AC020658.7-201ENST00000624274 2442 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 AL591122.2-201ENST00000624125 1853 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 INE2-201ENST00000630399 1874 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 CICP16-201ENST00000502609 2813 ntBASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM3Q9BZL3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC073548.1-201ENST00000624088 1882 ntBASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 RNPS1P1-201ENST00000507437 918 ntBASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC091304.2-201ENST00000564639 760 ntBASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 AL161645.1-201ENST00000622716 1255 ntBASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
SMIM3Q9BZL3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms