Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 AC105129.2-201ENST00000559536 390 ntBASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 MIR3619-201ENST00000579667 83 ntBASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPAP1Q9BWH6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AC005077.2-201ENST00000449786 690 ntBASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 OR10B1P-201ENST00000601666 907 ntBASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AL451050.2-201ENST00000606967 682 ntBASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AC138627.1-207ENST00000641560 1006 ntBASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AC055811.4-201ENST00000624039 1754 ntBASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPAP1Q9BWH6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AC018442.1-201ENST00000421439 2061 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AL136309.1-201ENST00000403917 691 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AL354877.1-201ENST00000424412 413 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 SERPINA13P-202ENST00000478994 924 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 NDUFV2P1-201ENST00000596415 907 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 AC138649.2-201ENST00000615886 705 ntBASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPAP1Q9BWH6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 MTHFR-210ENST00000641407 2387 ntBASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 AC018529.2-202ENST00000611482 3087 ntBASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.08■□□□□ 0.48
RPAP1Q9BWH6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AL662890.1-201ENST00000396818 632 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AC016700.1-201ENST00000429424 312 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 HIST2H2BB-201ENST00000449108 381 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AL391280.1-201ENST00000506969 1062 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms