Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YIPF4Q9BSR8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
YIPF4Q9BSR8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
YIPF4Q9BSR8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
YIPF4Q9BSR8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AC092552.1-201ENST00000547243 906 ntBASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
YIPF4Q9BSR8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AP006294.1-201ENST00000415407 339 ntBASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 GPR53P-205ENST00000457298 1084 ntBASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 AC008494.3-201ENST00000606615 944 ntBASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 LINC01230-201ENST00000625222 3017 ntBASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
YIPF4Q9BSR8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms