Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC041040.2-201ENST00000622926 2899 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 DRD5P1-201ENST00000456605 1438 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AL645937.2-201ENST00000396808 931 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 IGHV3-71-201ENST00000523324 359 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 SLC25A47P1-201ENST00000531577 414 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC025423.2-201ENST00000537570 439 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC002044.3-201ENST00000623314 541 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC133485.6-201ENST00000624045 688 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PPT1-215ENST00000641471 2368 ntBASIC13.59□□□□□ -0.23
USB1Q9BQ65 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
USB1Q9BQ65 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
USB1Q9BQ65 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
USB1Q9BQ65 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
USB1Q9BQ65 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
USB1Q9BQ65 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.58□□□□□ -0.23
USB1Q9BQ65 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
USB1Q9BQ65 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms