Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 AC073869.2-201ENST00000417338 1026 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 RPSAP15-201ENST00000448168 861 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 RN7SL81P-201ENST00000493781 261 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 MIR4722-201ENST00000578292 60 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 AC239868.1-201ENST00000369385 493 ntBASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP2Q96SN8 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDK5RAP2Q96SN8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.21■□□□□ 0.34
CDK5RAP2Q96SN8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC019193.1-201ENST00000506678 823 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC008723.1-201ENST00000506922 207 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC025262.2-201ENST00000623975 1056 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 MYADML-201ENST00000474610 2147 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 FAM90A2P-201ENST00000511144 1395 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 FAM90A25P-201ENST00000528404 1395 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 ORAOV1P1-201ENST00000503108 395 ntBASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP2Q96SN8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms