Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AKR1C7P-201ENST00000305623 895 ntBASIC14.17□□□□□ -0.14
NR1H4Q96RI1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 KRT18P34-201ENST00000488218 1270 ntBASIC14.17□□□□□ -0.14
NR1H4Q96RI1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 VENTXP1-201ENST00000569334 2716 ntBASIC14.17□□□□□ -0.14
NR1H4Q96RI1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 DLX4-206ENST00000611342 1662 ntBASIC14.17□□□□□ -0.14
NR1H4Q96RI1 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 RPS2P1-201ENST00000434010 821 ntBASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 OR7E14P-202ENST00000530490 1290 ntBASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms