Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC092896.1-201ENST00000465850 380 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 IGHEP2-201ENST00000519308 1256 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC092862.1-201ENST00000541534 533 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AHCYP3-201ENST00000420053 1279 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 RPS18P9-201ENST00000482817 460 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC120498.5-201ENST00000561757 299 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC090820.1-201ENST00000519722 591 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 FAM86B3P-203ENST00000523992 854 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC010632.2-201ENST00000588369 1224 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AL160191.2-201ENST00000603975 601 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC080013.5-201ENST00000607044 679 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 PTGER4P2-201ENST00000328411 252 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 PTGER4P3-201ENST00000458150 252 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC026691.1-201ENST00000602502 2017 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC092612.1-201ENST00000514501 998 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC013553.1-201ENST00000560906 267 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 MIR3188-201ENST00000583494 85 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC254633.1-201ENST00000606790 345 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms