Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 AC120045.2-201ENST00000567334 178 ntBASIC14.46□□□□□ -0.09
VMP1Q96GC9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.46□□□□□ -0.09
VMP1Q96GC9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VMP1Q96GC9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VMP1Q96GC9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
VMP1Q96GC9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
VMP1Q96GC9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VMP1Q96GC9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VMP1Q96GC9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VMP1Q96GC9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VMP1Q96GC9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VMP1Q96GC9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 C1QBPP1-201ENST00000400117 770 ntBASIC14.45□□□□□ -0.1
VMP1Q96GC9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.45□□□□□ -0.1
VMP1Q96GC9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 KRT8P22-201ENST00000562317 1415 ntBASIC14.45□□□□□ -0.1
VMP1Q96GC9 AL359711.2-201ENST00000563105 872 ntBASIC14.45□□□□□ -0.1
VMP1Q96GC9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.45□□□□□ -0.1
VMP1Q96GC9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.45□□□□□ -0.1
VMP1Q96GC9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VMP1Q96GC9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.44□□□□□ -0.1
VMP1Q96GC9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.44□□□□□ -0.1
VMP1Q96GC9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.44□□□□□ -0.1
VMP1Q96GC9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VMP1Q96GC9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.44□□□□□ -0.1
VMP1Q96GC9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms