Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDCA5Q96FF9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 MIR645-201ENST00000385283 94 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 OR5BD1P-201ENST00000532527 817 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC124068.2-201ENST00000569473 1109 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 CASP16P-204ENST00000635032 809 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC009093.10-201ENST00000641956 1442 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AL590440.2-201ENST00000641973 1595 ntBASIC17.18■□□□□ 0.34
CDCA5Q96FF9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA5Q96FF9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.17■□□□□ 0.34
CDCA5Q96FF9 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 PEBP1P2-201ENST00000603980 558 ntBASIC17.17■□□□□ 0.34
CDCA5Q96FF9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA5Q96FF9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDCA5Q96FF9 AP002353.1-201ENST00000528257 1599 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms