Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 DUX4L45-201ENST00000566406 1057 ntBASIC16.87■□□□□ 0.29
TNFRSF25Q93038 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AC008825.2-201ENST00000603374 718 ntBASIC16.87■□□□□ 0.29
TNFRSF25Q93038 COX11-210ENST00000639671 696 ntBASIC16.87■□□□□ 0.29
TNFRSF25Q93038 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AC152010.1-201ENST00000415779 2006 ntBASIC16.87■□□□□ 0.29
TNFRSF25Q93038 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF25Q93038 RN7SL832P-201ENST00000607781 1756 ntBASIC16.87■□□□□ 0.29
TNFRSF25Q93038 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC100850.1-201ENST00000506768 649 ntBASIC16.86■□□□□ 0.29
TNFRSF25Q93038 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC023310.1-201ENST00000554836 735 ntBASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 MIR6074-201ENST00000612054 107 ntBASIC16.86■□□□□ 0.29
TNFRSF25Q93038 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC012617.1-204ENST00000586340 2305 ntBASIC16.86■□□□□ 0.29
TNFRSF25Q93038 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 AC027601.5-201ENST00000624065 2482 ntBASIC16.86■□□□□ 0.29
TNFRSF25Q93038 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF25Q93038 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 SHC1P1-201ENST00000425230 1745 ntBASIC16.85■□□□□ 0.29
TNFRSF25Q93038 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF25Q93038 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms