Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MIR1226-201ENST00000408658 75 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 RNASEH2CP1-201ENST00000454281 502 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 DUX4L50-201ENST00000455245 715 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 ALG1L15P-201ENST00000482834 794 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AL080243.1-201ENST00000423293 1060 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AC022121.1-201ENST00000484584 579 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MIR2278-201ENST00000516344 96 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 AGGF1P1-201ENST00000509500 2073 ntBASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRUNE2Q8WUY3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 EMP3-204ENST00000596315 761 ntTSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
PRUNE2Q8WUY3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms