Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AL136309.1-201ENST00000403917 691 ntBASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC078991.1-201ENST00000437297 610 ntBASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC106820.3-201ENST00000561653 397 ntBASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC068587.8-201ENST00000641239 219 ntBASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AC087481.3-201ENST00000602886 1894 ntBASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2AF1L4Q8WU68 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ISCA2P1-201ENST00000425548 448 ntBASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 AC023824.1-201ENST00000562945 2975 ntBASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 KRT8P14-201ENST00000414254 1442 ntBASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
U2AF1L4Q8WU68 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AL136295.7-201ENST00000619226 1200 ntBASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms