Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.8■□□□□ 0.6
PROM2Q8N271 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PROM2Q8N271 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PROM2Q8N271 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC004522.1-201ENST00000419978 654 ntBASIC18.8■□□□□ 0.6
PROM2Q8N271 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC023141.7-201ENST00000430646 407 ntBASIC18.8■□□□□ 0.6
PROM2Q8N271 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.8■□□□□ 0.6
PROM2Q8N271 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC18.8■□□□□ 0.6
PROM2Q8N271 AC226150.1-201ENST00000544259 466 ntBASIC18.8■□□□□ 0.6
PROM2Q8N271 CYP4F36P-201ENST00000589193 186 ntBASIC18.8■□□□□ 0.6
PROM2Q8N271 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.8■□□□□ 0.6
PROM2Q8N271 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC18.8■□□□□ 0.6
PROM2Q8N271 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PROM2Q8N271 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.8■□□□□ 0.6
PROM2Q8N271 MTHFR-217ENST00000641820 1569 ntBASIC18.8■□□□□ 0.6
PROM2Q8N271 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PROM2Q8N271 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PROM2Q8N271 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 AL662844.4-201ENST00000606367 2838 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 ERP29P1-201ENST00000442902 706 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 RPL18AP8-201ENST00000486071 528 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AC118282.1-201ENST00000506408 765 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.79■□□□□ 0.6
PROM2Q8N271 IGHEP1-201ENST00000521393 651 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.79■□□□□ 0.6
PROM2Q8N271 AC131206.1-201ENST00000538078 1211 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.79■□□□□ 0.6
PROM2Q8N271 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.79■□□□□ 0.6
PROM2Q8N271 AC112220.4-201ENST00000604982 1263 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AL034374.2-201ENST00000605281 548 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AC024933.1-201ENST00000608472 348 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AC009145.4-201ENST00000625119 1294 ntBASIC18.79■□□□□ 0.6
PROM2Q8N271 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.79■□□□□ 0.6
PROM2Q8N271 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.79■□□□□ 0.6
PROM2Q8N271 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PROM2Q8N271 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PROM2Q8N271 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PROM2Q8N271 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PROM2Q8N271 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PROM2Q8N271 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.78■□□□□ 0.6
PROM2Q8N271 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PROM2Q8N271 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PROM2Q8N271 ACTG1P19-201ENST00000418987 1116 ntBASIC18.78■□□□□ 0.6
PROM2Q8N271 KRT18P46-201ENST00000435568 1279 ntBASIC18.78■□□□□ 0.6
PROM2Q8N271 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.78■□□□□ 0.6
PROM2Q8N271 AC017099.1-201ENST00000448261 1028 ntBASIC18.78■□□□□ 0.6
PROM2Q8N271 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms