Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC006001.1-201ENST00000325130 474 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 BOLA2P3-201ENST00000404566 256 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 MESTP3-201ENST00000503460 968 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC006453.4-201ENST00000636949 1252 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 AC003102.2-201ENST00000589195 1469 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 PKD1P5-201ENST00000532415 10291 ntBASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 FKBP4P6-201ENST00000457486 1332 ntBASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AC007969.1-201ENST00000433675 447 ntBASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 FTLP10-202ENST00000505798 471 ntBASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AL391280.1-201ENST00000506969 1062 ntBASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.77■□□□□ 0.12
SCUBE3Q8IX30 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCUBE3Q8IX30 INTS4P1-203ENST00000641008 3683 ntBASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 RN7SKP230-201ENST00000365642 335 ntBASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 CD8B2-202ENST00000417670 633 ntBASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 AC026954.1-201ENST00000429771 1293 ntBASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.76■□□□□ 0.11
SCUBE3Q8IX30 AC104989.1-201ENST00000519711 778 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms