Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 AL590235.1-201ENST00000564650 861 ntBASIC20.52■□□□□ 0.88
UBR1Q8IWV7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 AC091769.1-201ENST00000619576 568 ntBASIC20.52■□□□□ 0.88
UBR1Q8IWV7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBR1Q8IWV7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBR1Q8IWV7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBR1Q8IWV7 KRT8P18-201ENST00000413425 1445 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC015688.4-201ENST00000580780 1647 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC087203.1-201ENST00000532111 1181 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC145285.5-201ENST00000562217 361 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC018846.1-201ENST00000568231 183 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AL391005.1-201ENST00000623953 2435 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 FKBP4P8-201ENST00000610931 1369 ntBASIC20.51■□□□□ 0.87
UBR1Q8IWV7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
UBR1Q8IWV7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 BX679664.3-201ENST00000414070 555 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PSAT1P2-201ENST00000426107 972 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 STK24P1-201ENST00000455035 1291 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 AC113935.1-201ENST00000471722 555 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 AC011462.4-201ENST00000616866 449 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ACE3P-201ENST00000423435 1973 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 KRT8P43-201ENST00000406052 1458 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 OR10N1P-201ENST00000392758 869 ntBASIC20.5■□□□□ 0.87
UBR1Q8IWV7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBR1Q8IWV7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBR1Q8IWV7 EEF1DP2-201ENST00000433698 843 ntBASIC20.49■□□□□ 0.87
UBR1Q8IWV7 AL161932.2-201ENST00000435436 679 ntBASIC20.49■□□□□ 0.87
UBR1Q8IWV7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms