Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ANKRD19P-201ENST00000338192 862 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 MIR1909-201ENST00000411312 80 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 CD8B2-202ENST00000417670 633 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 RPL7P3-201ENST00000441388 714 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 SNX29P1-201ENST00000548357 1007 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 AC018529.2-202ENST00000611482 3087 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 LINC00552-201ENST00000625151 2579 ntBASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM90A1Q86YD7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FAM90A1Q86YD7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
FAM90A1Q86YD7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 OR8S1-201ENST00000310194 1080 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 FTLP10-202ENST00000505798 471 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC104989.1-201ENST00000519711 778 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 IGHV3-71-201ENST00000523324 359 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC138696.2-201ENST00000607376 223 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC138466.3-201ENST00000619983 221 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 RHOXF1P1-202ENST00000635473 501 ntBASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM90A1Q86YD7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms