Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKAP1Q86WV1 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SKAP1Q86WV1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKAP1Q86WV1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.7■□□□□ 0.58
SKAP1Q86WV1 ST20-AS1-201ENST00000560255 4223 ntBASIC18.7■□□□□ 0.58
SKAP1Q86WV1 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AGAP10P-201ENST00000454844 2418 ntBASIC18.69■□□□□ 0.58
SKAP1Q86WV1 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC004890.2-204ENST00000481968 304 ntBASIC18.69■□□□□ 0.58
SKAP1Q86WV1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 IGHV3-42-201ENST00000520410 361 ntBASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC138761.1-201ENST00000584393 385 ntBASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKAP1Q86WV1 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 RNU1-114P-201ENST00000365297 166 ntBASIC18.68■□□□□ 0.58
SKAP1Q86WV1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 AL158211.3-201ENST00000607385 239 ntBASIC18.68■□□□□ 0.58
SKAP1Q86WV1 INE2-201ENST00000630399 1874 ntBASIC18.68■□□□□ 0.58
SKAP1Q86WV1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 RN7SL832P-201ENST00000607781 1756 ntBASIC18.68■□□□□ 0.58
SKAP1Q86WV1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKAP1Q86WV1 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.67■□□□□ 0.58
SKAP1Q86WV1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms