Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TMEM14DP-201ENST00000422205 345 ntBASIC13.86□□□□□ -0.19
ZNF550Q7Z398 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 AP005019.2-201ENST00000615104 511 ntBASIC13.86□□□□□ -0.19
ZNF550Q7Z398 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF550Q7Z398 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 DUX4L47-201ENST00000566374 394 ntBASIC13.85□□□□□ -0.19
ZNF550Q7Z398 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AC113367.3-201ENST00000508316 1912 ntBASIC13.85□□□□□ -0.19
ZNF550Q7Z398 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AC023090.2-201ENST00000625182 2110 ntBASIC13.85□□□□□ -0.19
ZNF550Q7Z398 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ZNF550Q7Z398 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 RNU1-114P-201ENST00000365297 166 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms