Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AC015911.4-201ENST00000588022 1070 ntBASIC15.15■□□□□ 0.02
RAPH1Q70E73 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AL691403.2-201ENST00000618460 490 ntBASIC15.15■□□□□ 0.02
RAPH1Q70E73 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AC136759.1-202ENST00000530858 2194 ntBASIC15.15■□□□□ 0.02
RAPH1Q70E73 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.15■□□□□ 0.02
RAPH1Q70E73 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAPH1Q70E73 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 MIR943-201ENST00000401286 94 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 MEIS3P1-201ENST00000495167 958 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 ZNF890P-202ENST00000530367 1156 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 AC093028.1-201ENST00000622998 982 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 AL590560.3-201ENST00000623350 461 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 AL158212.4-201ENST00000624062 1286 ntBASIC15.14■□□□□ 0.01
RAPH1Q70E73 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
RAPH1Q70E73 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAPH1Q70E73 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms