Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AP001063.1-201ENST00000568332 529 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AL033527.5-201ENST00000641382 801 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AC140479.7-201ENST00000636301 2332 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 CICP20-201ENST00000443330 2801 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ST20-AS1-201ENST00000560255 4223 ntBASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AL603764.1-201ENST00000636452 321 ntBASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NHLRC1Q6VVB1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC018529.2-202ENST00000611482 3087 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms