Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PEG13-201ENST00000631594 5667 ntBASIC13.71□□□□□ -0.21
RBM48Q5RL73 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 BCAR1-209ENST00000546196 1340 ntBASIC13.71□□□□□ -0.21
RBM48Q5RL73 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 HIST3H2BA-201ENST00000436555 524 ntBASIC13.71□□□□□ -0.21
RBM48Q5RL73 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.71□□□□□ -0.21
RBM48Q5RL73 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RBM48Q5RL73 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.71□□□□□ -0.22
RBM48Q5RL73 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
RBM48Q5RL73 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.71□□□□□ -0.22
RBM48Q5RL73 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RBM48Q5RL73 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AC068137.2-201ENST00000605408 478 ntBASIC13.7□□□□□ -0.22
RBM48Q5RL73 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AC004877.2-201ENST00000623941 599 ntBASIC13.7□□□□□ -0.22
RBM48Q5RL73 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AL139385.1-201ENST00000611744 3272 ntBASIC13.7□□□□□ -0.22
RBM48Q5RL73 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RBM48Q5RL73 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RBM48Q5RL73 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms