Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AC006122.1-201ENST00000493323 440 ntBASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AC010491.1-201ENST00000563101 2797 ntBASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 AC011840.2-201ENST00000563063 1520 ntBASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO4Q2I0M5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 MARK2P16-201ENST00000605714 1723 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 RN7SKP109-201ENST00000410592 316 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ACTG1P19-201ENST00000418987 1116 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 MIR6746-201ENST00000620971 63 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC002044.2-201ENST00000624910 970 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC144522.1-201ENST00000625111 1658 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms