Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2B3Q16720 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
ATP2B3Q16720 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2B3Q16720 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2B3Q16720 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2B3Q16720 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2B3Q16720 SALL4P5-201ENST00000419001 1760 ntBASIC18.33■□□□□ 0.53
ATP2B3Q16720 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.33■□□□□ 0.52
ATP2B3Q16720 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 MIR3615-201ENST00000581999 87 ntBASIC18.33■□□□□ 0.52
ATP2B3Q16720 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP2B3Q16720 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 AC068587.6-202ENST00000641839 5619 ntBASIC18.33■□□□□ 0.52
ATP2B3Q16720 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2B3Q16720 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 AP001258.2-201ENST00000529891 490 ntBASIC18.32■□□□□ 0.52
ATP2B3Q16720 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP2B3Q16720 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2B3Q16720 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 AGAP7P-201ENST00000582299 2062 ntBASIC18.31■□□□□ 0.52
ATP2B3Q16720 AGAP14-201ENST00000624701 2060 ntBASIC18.31■□□□□ 0.52
ATP2B3Q16720 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 AC004898.1-201ENST00000451057 766 ntBASIC18.31■□□□□ 0.52
ATP2B3Q16720 KRT8P13-201ENST00000463294 1010 ntBASIC18.31■□□□□ 0.52
ATP2B3Q16720 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 MIR4783-201ENST00000580343 82 ntBASIC18.31■□□□□ 0.52
ATP2B3Q16720 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B3Q16720 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B3Q16720 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms