Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
IRX3P78415 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX3P78415 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX3P78415 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 AC006449.5-201ENST00000610658 2098 ntBASIC17.49■□□□□ 0.39
IRX3P78415 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 DPM3-202ENST00000368399 517 ntBASIC17.49■□□□□ 0.39
IRX3P78415 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IRX3P78415 FXNP2-201ENST00000411625 547 ntBASIC17.49■□□□□ 0.39
IRX3P78415 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.49■□□□□ 0.39
IRX3P78415 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.49■□□□□ 0.39
IRX3P78415 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.49■□□□□ 0.39
IRX3P78415 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.49■□□□□ 0.39
IRX3P78415 FGFR3P5-201ENST00000564496 886 ntBASIC17.49■□□□□ 0.39
IRX3P78415 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.49■□□□□ 0.39
IRX3P78415 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.49■□□□□ 0.39
IRX3P78415 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 CICP20-201ENST00000443330 2801 ntBASIC17.49■□□□□ 0.39
IRX3P78415 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 AC007686.3-201ENST00000619017 3487 ntBASIC17.49■□□□□ 0.39
IRX3P78415 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX3P78415 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX3P78415 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX3P78415 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX3P78415 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX3P78415 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX3P78415 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX3P78415 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX3P78415 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX3P78415 TUBB8P8-201ENST00000458717 1058 ntBASIC17.48■□□□□ 0.39
IRX3P78415 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 AC026434.2-201ENST00000506094 1078 ntBASIC17.48■□□□□ 0.39
IRX3P78415 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX3P78415 MIR4683-201ENST00000579659 81 ntBASIC17.48■□□□□ 0.39
IRX3P78415 RN7SL163P-201ENST00000583100 276 ntBASIC17.48■□□□□ 0.39
IRX3P78415 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
IRX3P78415 AC026740.1-201ENST00000607068 791 ntBASIC17.48■□□□□ 0.39
IRX3P78415 AL136301.1-201ENST00000615830 422 ntBASIC17.48■□□□□ 0.39
IRX3P78415 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX3P78415 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX3P78415 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms