Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RPS3AP61247 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RPS3AP61247 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 AL035633.1-201ENST00000406139 838 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 SPDYE18-201ENST00000510091 1050 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 AC104596.2-201ENST00000512793 793 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.17□□□□□ -0.14
RPS3AP61247 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.17□□□□□ -0.14
RPS3AP61247 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 RRP7BP-205ENST00000566851 833 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 AC140912.1-201ENST00000577171 1054 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 LINC01115-203ENST00000606068 577 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.17□□□□□ -0.14
RPS3AP61247 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.17□□□□□ -0.14
RPS3AP61247 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 NUTM2HP-201ENST00000442076 2498 ntBASIC14.17□□□□□ -0.14
RPS3AP61247 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC005562.1-201ENST00000583030 3219 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 ZBED1P1-201ENST00000502364 1930 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.16□□□□□ -0.14
RPS3AP61247 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 RARRES2P5-201ENST00000564013 466 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 AC036164.1-201ENST00000570544 333 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.16□□□□□ -0.14
RPS3AP61247 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 SLC7A15P-201ENST00000424028 1363 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RPS3AP61247 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 AC067750.1-201ENST00000608826 6545 ntBASIC14.16□□□□□ -0.14
RPS3AP61247 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms