Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 AC018892.3-201ENST00000623986 2499 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC005034.1-201ENST00000426657 489 ntBASIC14.32□□□□□ -0.12
NR1H2P55055 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 FAM207CP-201ENST00000443486 507 ntBASIC14.32□□□□□ -0.12
NR1H2P55055 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.32□□□□□ -0.12
NR1H2P55055 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.32□□□□□ -0.12
NR1H2P55055 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 CES1P1-201ENST00000421606 1704 ntBASIC14.32□□□□□ -0.12
NR1H2P55055 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H2P55055 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
NR1H2P55055 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H2P55055 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NR1H2P55055 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 AC018442.1-201ENST00000421439 2061 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H2P55055 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 AC236430.1-201ENST00000402231 743 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 AL353705.2-201ENST00000428243 662 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 AC093724.1-201ENST00000448659 1027 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H2P55055 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 TMEM198B-204ENST00000484016 896 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H2P55055 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H2P55055 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H2P55055 MIR4453-201ENST00000584019 89 ntBASIC14.31□□□□□ -0.12
NR1H2P55055 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H2P55055 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms