Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-5P52952 AC026471.5-201ENST00000615068 467 ntBASIC12.73□□□□□ -0.37
NKX2-5P52952 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-5P52952 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-5P52952 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-5P52952 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-5P52952 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-5P52952 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NKX2-5P52952 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.73□□□□□ -0.37
NKX2-5P52952 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-5P52952 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
NKX2-5P52952 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-5P52952 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AP002469.2-201ENST00000531724 424 ntBASIC12.72□□□□□ -0.37
NKX2-5P52952 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC142381.4-202ENST00000563973 229 ntBASIC12.72□□□□□ -0.37
NKX2-5P52952 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 AL049637.2-201ENST00000641778 930 ntBASIC12.72□□□□□ -0.37
NKX2-5P52952 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 TNKS-213ENST00000522110 2900 ntBASIC12.72□□□□□ -0.37
NKX2-5P52952 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-5P52952 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 Z98257.2-202ENST00000641138 1548 ntBASIC12.72□□□□□ -0.37
NKX2-5P52952 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-5P52952 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-5P52952 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AC124319.4-201ENST00000622931 2161 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-5P52952 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
NKX2-5P52952 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-5P52952 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms