Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC152010.1-201ENST00000415779 2006 ntBASIC14.41□□□□□ -0.1
SLC6A12P48065 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC6A12P48065 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC6A12P48065 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC6A12P48065 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC6A12P48065 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC6A12P48065 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 NME2P1-201ENST00000426182 414 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 C2orf27AP3-201ENST00000434123 579 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC6A12P48065 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC6A12P48065 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.4□□□□□ -0.1
SLC6A12P48065 AC103988.2-201ENST00000561804 725 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC6A12P48065 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC6A12P48065 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 AL354718.3-201ENST00000616414 581 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 CR382287.1-201ENST00000623954 586 ntBASIC14.4□□□□□ -0.1
SLC6A12P48065 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC6A12P48065 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC6A12P48065 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC6A12P48065 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC6A12P48065 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC6A12P48065 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 AC027601.5-201ENST00000624065 2482 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC6A12P48065 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 AC015656.1-201ENST00000624209 3578 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SLC6A12P48065 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SLC6A12P48065 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 CD8B2-202ENST00000417670 633 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 CNN2P8-201ENST00000421872 913 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 FAM197Y7-201ENST00000432892 766 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC6A12P48065 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC6A12P48065 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC6A12P48065 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC6A12P48065 AC244669.2-201ENST00000612320 853 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms