Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.7■□□□□ 0.1
SLC1A1P43005 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC1A1P43005 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC1A1P43005 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC1A1P43005 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 LINC01230-201ENST00000625222 3017 ntBASIC15.7■□□□□ 0.1
SLC1A1P43005 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A1P43005 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A1P43005 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A1P43005 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A1P43005 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A1P43005 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.69■□□□□ 0.1
SLC1A1P43005 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A1P43005 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC1A1P43005 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC1A1P43005 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A1P43005 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A1P43005 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A1P43005 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 SBF1P1-201ENST00000444527 5631 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A1P43005 AC098850.1-201ENST00000419919 790 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 PMS2P2-201ENST00000425039 1128 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A1P43005 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 KRT18P25-201ENST00000508931 1278 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SLC1A1P43005 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 AP001063.1-201ENST00000568332 529 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC1A1P43005 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms