Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC009093.2-202ENST00000620513 2079 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 MRPL37P1-201ENST00000592451 1337 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 LINC00552-201ENST00000625151 2579 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AL354702.1-201ENST00000442006 1960 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.88□□□□□ -0.03
HMGCLP35914 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCLP35914 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AL136309.1-201ENST00000403917 691 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AC119751.2-201ENST00000504529 210 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.88□□□□□ -0.03
HMGCLP35914 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCLP35914 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.88□□□□□ -0.03
HMGCLP35914 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCLP35914 ZACNP1-201ENST00000612259 710 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 MIR6805-201ENST00000615055 62 ntBASIC14.88□□□□□ -0.03
HMGCLP35914 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HMGCLP35914 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HMGCLP35914 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.88□□□□□ -0.03
HMGCLP35914 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCLP35914 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCLP35914 AC007686.3-201ENST00000619017 3487 ntBASIC14.87□□□□□ -0.03
HMGCLP35914 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCLP35914 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 CNN2P10-201ENST00000443067 918 ntBASIC14.87□□□□□ -0.03
HMGCLP35914 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCLP35914 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCLP35914 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCLP35914 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCLP35914 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCLP35914 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms