Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 AC105917.1-201ENST00000506637 2539 ntBASIC13.37□□□□□ -0.27
HOXC12P31275 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
HOXC12P31275 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 AL139094.1-201ENST00000405549 1188 ntBASIC13.37□□□□□ -0.27
HOXC12P31275 AC026954.1-201ENST00000429771 1293 ntBASIC13.37□□□□□ -0.27
HOXC12P31275 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.37□□□□□ -0.27
HOXC12P31275 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.37□□□□□ -0.27
HOXC12P31275 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 AC022616.1-201ENST00000518688 554 ntBASIC13.37□□□□□ -0.27
HOXC12P31275 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
HOXC12P31275 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
HOXC12P31275 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
HOXC12P31275 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HOXC12P31275 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HOXC12P31275 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.36□□□□□ -0.27
HOXC12P31275 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 SLC25A24P2-201ENST00000415059 510 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 CALR4P-201ENST00000431943 946 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 AC106760.1-201ENST00000508690 800 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.36□□□□□ -0.27
HOXC12P31275 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 AP001258.2-201ENST00000529891 490 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 AL118558.3-201ENST00000607414 1079 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 RHOXF1P1-202ENST00000635473 501 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 AL603764.1-201ENST00000636452 321 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 AC008687.7-202ENST00000637404 953 ntBASIC13.36□□□□□ -0.27
HOXC12P31275 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms