Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RXRBP28702 OR52M2P-201ENST00000414298 959 ntBASIC19.04■□□□□ 0.64
RXRBP28702 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.04■□□□□ 0.64
RXRBP28702 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RXRBP28702 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.04■□□□□ 0.64
RXRBP28702 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RXRBP28702 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.04■□□□□ 0.64
RXRBP28702 ABCC6P1-203ENST00000565566 1170 ntBASIC19.04■□□□□ 0.64
RXRBP28702 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC19.04■□□□□ 0.64
RXRBP28702 AC112220.4-201ENST00000604982 1263 ntBASIC19.04■□□□□ 0.64
RXRBP28702 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.04■□□□□ 0.64
RXRBP28702 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 HDGF-202ENST00000368206 960 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.03■□□□□ 0.64
RXRBP28702 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 EEF1GP8-201ENST00000506566 1154 ntBASIC19.03■□□□□ 0.64
RXRBP28702 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC19.03■□□□□ 0.64
RXRBP28702 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 NDUFB10P1-201ENST00000567319 521 ntBASIC19.03■□□□□ 0.64
RXRBP28702 RN7SL478P-201ENST00000584358 298 ntBASIC19.03■□□□□ 0.64
RXRBP28702 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.03■□□□□ 0.64
RXRBP28702 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 REXO1L4P-201ENST00000605109 1937 ntBASIC19.03■□□□□ 0.64
RXRBP28702 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RXRBP28702 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RXRBP28702 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 AC022080.1-201ENST00000366255 781 ntBASIC19.02■□□□□ 0.64
RXRBP28702 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 ST13P19-201ENST00000442505 1124 ntBASIC19.02■□□□□ 0.64
RXRBP28702 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC19.02■□□□□ 0.64
RXRBP28702 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC19.02■□□□□ 0.64
RXRBP28702 RN7SL480P-201ENST00000581481 294 ntBASIC19.02■□□□□ 0.64
RXRBP28702 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RXRBP28702 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.02■□□□□ 0.64
RXRBP28702 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RXRBP28702 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RXRBP28702 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RXRBP28702 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.02■□□□□ 0.63
RXRBP28702 SHMT1P1-201ENST00000419974 1312 ntBASIC19.01■□□□□ 0.63
RXRBP28702 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 AL359258.3-201ENST00000622910 2331 ntBASIC19.01■□□□□ 0.63
RXRBP28702 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms