Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 MSTO2P-201ENST00000314835 1709 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TNFSF4P23510 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 OR8S1-201ENST00000310194 1080 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TNFSF4P23510 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 GK-202ENST00000378941 458 ntTSL 3 BASIC12.88□□□□□ -0.35
TNFSF4P23510 AC092933.1-201ENST00000393644 945 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.88□□□□□ -0.35
TNFSF4P23510 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.88□□□□□ -0.35
TNFSF4P23510 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 HLA-K-203ENST00000430151 1046 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.88□□□□□ -0.35
TNFSF4P23510 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 AC025279.2-201ENST00000569730 653 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.88□□□□□ -0.35
TNFSF4P23510 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 CICP4-201ENST00000447359 2812 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 AC126177.1-201ENST00000547829 2218 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TNFSF4P23510 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 AC092384.3-202ENST00000564646 2873 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.87□□□□□ -0.35
TNFSF4P23510 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 AC112492.5-201ENST00000421897 457 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 U91328.1-201ENST00000437528 223 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 AC245100.3-201ENST00000441281 285 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 FTH1P14-201ENST00000482930 551 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 AC104989.1-201ENST00000519711 778 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.87□□□□□ -0.35
TNFSF4P23510 AP000845.1-201ENST00000581677 2131 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.87□□□□□ -0.35
TNFSF4P23510 MIR6805-201ENST00000615055 62 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 ENPP7P14-201ENST00000621765 1040 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 ZBED1P1-201ENST00000502364 1930 ntBASIC12.87□□□□□ -0.35
TNFSF4P23510 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TNFSF4P23510 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TNFSF4P23510 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms