Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 PMPCAP1-201ENST00000508114 1576 ntBASIC12.01□□□□□ -0.49
APOC3P02656 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
APOC3P02656 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
APOC3P02656 FAM8A6P-201ENST00000407496 1135 ntBASIC12.01□□□□□ -0.49
APOC3P02656 HCG4-201ENST00000418983 998 ntBASIC12.01□□□□□ -0.49
APOC3P02656 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.01□□□□□ -0.49
APOC3P02656 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC3P02656 PAWRP1-201ENST00000451083 565 ntBASIC12.01□□□□□ -0.49
APOC3P02656 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC3P02656 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC3P02656 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AC097493.4-201ENST00000641197 219 ntBASIC12.01□□□□□ -0.49
APOC3P02656 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
APOC3P02656 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
APOC3P02656 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 AC090643.2-201ENST00000623442 2029 ntBASIC12.01□□□□□ -0.49
APOC3P02656 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 AC060814.4-201ENST00000594169 2163 ntBASIC12.01□□□□□ -0.49
APOC3P02656 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
APOC3P02656 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
APOC3P02656 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC3P02656 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12□□□□□ -0.49
APOC3P02656 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
APOC3P02656 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12□□□□□ -0.49
APOC3P02656 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
APOC3P02656 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12□□□□□ -0.49
APOC3P02656 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12□□□□□ -0.49
APOC3P02656 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12□□□□□ -0.49
APOC3P02656 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12□□□□□ -0.49
APOC3P02656 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12□□□□□ -0.49
APOC3P02656 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12□□□□□ -0.49
APOC3P02656 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12□□□□□ -0.49
APOC3P02656 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12□□□□□ -0.49
APOC3P02656 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12□□□□□ -0.49
APOC3P02656 AC006970.2-201ENST00000450065 779 ntBASIC12□□□□□ -0.49
APOC3P02656 AC087163.2-201ENST00000457299 853 ntBASIC12□□□□□ -0.49
APOC3P02656 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12□□□□□ -0.49
APOC3P02656 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC3P02656 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms