Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOA1P02647 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 AC016397.2-201ENST00000624848 1985 ntBASIC13.44□□□□□ -0.26
APOA1P02647 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.44□□□□□ -0.26
APOA1P02647 RPS2P1-201ENST00000434010 821 ntBASIC13.44□□□□□ -0.26
APOA1P02647 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 HNRNPUP1-201ENST00000554987 333 ntBASIC13.44□□□□□ -0.26
APOA1P02647 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.44□□□□□ -0.26
APOA1P02647 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.44□□□□□ -0.26
APOA1P02647 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.44□□□□□ -0.26
APOA1P02647 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.44□□□□□ -0.26
APOA1P02647 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
APOA1P02647 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.44□□□□□ -0.26
APOA1P02647 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOA1P02647 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
APOA1P02647 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.43□□□□□ -0.26
APOA1P02647 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 AL136982.4-201ENST00000437689 1740 ntBASIC13.43□□□□□ -0.26
APOA1P02647 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.43□□□□□ -0.26
APOA1P02647 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.43□□□□□ -0.26
APOA1P02647 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 AC105339.3-201ENST00000560043 636 ntBASIC13.43□□□□□ -0.26
APOA1P02647 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.43□□□□□ -0.26
APOA1P02647 AL121772.3-201ENST00000610840 674 ntBASIC13.43□□□□□ -0.26
APOA1P02647 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
APOA1P02647 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
APOA1P02647 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOA1P02647 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
APOA1P02647 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms