Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDGFBP01127 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 AC112504.1-201ENST00000623415 1841 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDGFBP01127 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 AC073869.2-201ENST00000417338 1026 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.8□□□□□ -0.04
PDGFBP01127 HLA-DPA2-205ENST00000433582 733 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 KRT18P46-201ENST00000435568 1279 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.8□□□□□ -0.04
PDGFBP01127 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 RPL18AP8-201ENST00000486071 528 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 RN7SL582P-201ENST00000491078 279 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 OR5BD1P-201ENST00000532527 817 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.8□□□□□ -0.04
PDGFBP01127 AC003686.1-201ENST00000550956 1034 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDGFBP01127 GOLGA2P7-209ENST00000560408 745 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
PDGFBP01127 AC010976.2-201ENST00000609697 852 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.8□□□□□ -0.04
PDGFBP01127 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 AHCYP4-201ENST00000419201 1315 ntBASIC14.8□□□□□ -0.04
PDGFBP01127 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFBP01127 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFBP01127 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFBP01127 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 PTGER4P2-201ENST00000328411 252 ntBASIC14.79□□□□□ -0.04
PDGFBP01127 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDGFBP01127 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 PTGER4P3-201ENST00000458150 252 ntBASIC14.79□□□□□ -0.04
PDGFBP01127 AC083801.1-201ENST00000491689 358 ntBASIC14.79□□□□□ -0.04
PDGFBP01127 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFBP01127 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFBP01127 RNA5SP406-201ENST00000516106 112 ntBASIC14.79□□□□□ -0.04
PDGFBP01127 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFBP01127 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFBP01127 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFBP01127 AL118522.1-201ENST00000611368 560 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms