Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TIMP1P01033 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 PGAM1P12-201ENST00000505622 748 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.87■□□□□ 0.13
TIMP1P01033 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 AC226150.1-201ENST00000544259 466 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 RN7SL665P-201ENST00000578793 300 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TIMP1P01033 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.87■□□□□ 0.13
TIMP1P01033 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 AP005117.1-202ENST00000581724 1908 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 CTBP2P8-201ENST00000422584 1330 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 AP002353.1-201ENST00000528257 1599 ntBASIC15.87■□□□□ 0.13
TIMP1P01033 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 AC092850.2-201ENST00000623821 2697 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TIMP1P01033 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TIMP1P01033 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 RN7SL494P-201ENST00000461517 304 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 RN7SL23P-201ENST00000484055 275 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
TIMP1P01033 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 SIGLEC22P-201ENST00000599104 714 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 PEBP1P2-201ENST00000603980 558 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 AC012073.1-201ENST00000606114 1108 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 CASP16P-204ENST00000635032 809 ntBASIC15.86■□□□□ 0.13
TIMP1P01033 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TIMP1P01033 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
TIMP1P01033 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TIMP1P01033 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.85■□□□□ 0.13
TIMP1P01033 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.85■□□□□ 0.13
TIMP1P01033 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms